Doesn't matter if it is SQLite or MySQL!  Using version 1.4.0 on Fedora Core 6.  All permissions are the same, I can pick out entire directories that are missing!

Any ideas?

Do those dirs have anything in common? Perhaps particular characters in the directory name (which would be a reportable bug if it still happens after upgrading to 1.4.1). Or perhaps the directory permissions are such that the user you're running Amarok as can't read them.

Maybe amarok is installed without support for a particular filetype?

Some things to look at, anyway

It definatly is not the file type or permissions.  One particular folder was named MP3, i'll check for some pattern.

Thanks, anything else to check for?